Insertion junction: CLIP2.072723_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.072723
Chromosome:chromosome 1
Location:957955
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre01.g005500 (1 of 2) PTHR10783//PTHR10783:SF3 - XENOTROPIC AND POLYTROPIC RETROVIRUS RECEPTOR 1-RELATED // VACUOLAR TRANSPORTER CHAPERONE 4 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATAGAAAGGGACTGCTTTCACCGTTGGGGTGGAAACAGACACAAAGGTAC
Internal bar code:ACAAATGAAGTAACATCAGGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:98
LEAP-Seq percent confirming:40.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:TCAAGACGTTCACGGAGGTG
Suggested primer 2:GTCGTACGCATACTCCAGCA