Insertion junction: CLIP2.072726_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.072726
Chromosome:chromosome 7
Location:2645458
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g330550 5'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAAACCCCCAAACCCCCAGCTTGCACGATGCACCTATCGTGATGCCCCAC
Internal bar code:CGTCGTAGAATTATTAGGATAA

Confirmation - LEAP-Seq

LEAP-Seq distance:781
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:GCAGAGCGATTGTGATGCAG
Suggested primer 2:AGAAAGGCAGCCAATCCTCC