Insertion junction: CLIP2.072727_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.072727
Chromosome:plastome
Location:20751
Confidence (%):40
Locus systematic id Locus common name Defline Feature
CreCp.g802271 ChreCp009,2717052,chlL light-independent protochlorophyllide reductase iron-sulfer ATP-binding protein; (1 of 1) K04037 - light-independent protochlorophyllide reductase subunit L (chlL) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGAAACTCCATCGGAAGATTATATTTGTAATTTTTATTTAAATATTGCT
Internal bar code:GTATAAGTTTGTGTGCGATTCC

Confirmation - LEAP-Seq

LEAP-Seq distance:707
LEAP-Seq percent confirming:54.5455
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:GAAGCAGCCAACAAATGCCA
Suggested primer 2:ACGGAGGTTATGGGGGTGTA