Insertion junction: CLIP2.072728_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.072728
Chromosome:chromosome 10
Location:4085847
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g448200 ARL9 ARF-like GTPase; (1 of 4) K07937 - ADP-ribosylation factor 1 (ARF1) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCATGTTGCGTGTCTTGCAGCGATGGCGTCCATGTTGGAGCTCGAAACCG
Internal bar code:TTGGCGTCGAGGCTGATACCAT

Confirmation - LEAP-Seq

LEAP-Seq distance:653
LEAP-Seq percent confirming:44.4444
LEAP-Seq n confirming:36
LEAP-Seq n nonconfirming:45
LEAP-Seq n unique pos:81

Suggested primers for confirmation by PCR

Suggested primer 1:TGCGTTTGCTGTGCCTACTA
Suggested primer 2:CGGTGTTGTGTTGCAGAGTG