Insertion junction: CLIP2.072747_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.072747
Chromosome:plastome
Location:63424
Confidence (%):63
Locus systematic id Locus common name Defline Feature
CreCp.g802290 ChreCp026,2716975,psbM photosystem II protein M; (1 of 1) K02714 - photosystem II PsbM protein (psbM) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACTTTGTAACTCTAGACGGTATGTCAATATTCTTGATCAAAAGGGAGTT
Internal bar code:TCAAATGGTGGGTATGTTACGG

Confirmation - LEAP-Seq

LEAP-Seq distance:81
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:GTTTCCCCTTCCCCTTACGG
Suggested primer 2:TGAACAAACACGGTGCAACG