Insertion junction: CLIP2.072763_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.072763
Chromosome:chromosome 12
Location:3479443
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g497150 3'UTR
Cre12.g497200 FAP216 EF-Hand Flagellar Associated Protein 216 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGAGTGATACAACCAAGGTAGTTCCAATAGATATGTGGGGTTCCTGCAG
Internal bar code:GAGGTGTTTCCAGTCCGAGAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:6558
LEAP-Seq percent confirming:94.0476
LEAP-Seq n confirming:79
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:84

Suggested primers for confirmation by PCR

Suggested primer 1:AGATACGCGACACCACCAAG
Suggested primer 2:TGGTTTGAGCGAGGCCTTAG