Insertion junction: CLIP2.072771_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.072771
Chromosome:chromosome 12
Location:2096165
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g510150 (1 of 24) IPR001680//IPR017986//IPR020472 - WD40 repeat // WD40-repeat-containing domain // G-protein beta WD-40 repeat 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCCTCAGACATTAGTCCCTGGGAGGGATGTCTAGGAAACGGCCAAAATG
Internal bar code:AAAGTTGGTTAAATCTGGGCAC

Confirmation - LEAP-Seq

LEAP-Seq distance:2162
LEAP-Seq percent confirming:97.3684
LEAP-Seq n confirming:37
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:38

Suggested primers for confirmation by PCR

Suggested primer 1:GTGTCGCACACGGATATTGC
Suggested primer 2:GCTGTACAACGTGGACCAGA