Insertion junction: CLIP2.072774_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.072774
Chromosome:chromosome 10
Location:2692323
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre10.g437550 5'UTR
Cre10.g801134 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTACCTGCAAGACACCGCCGCGCAGCTGGGCATATCCGTGCGGCAGCAG
Internal bar code:GAAAAGAGTGTTACGAGTTGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:898
LEAP-Seq percent confirming:78.125
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:TGTACCTCTCAAAGCTGCCG
Suggested primer 2:GTGTGTTTACGCCGTGCTTT