Insertion junction: CLIP2.072776_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.072776
Chromosome:chromosome 10
Location:5323114
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre10.g456700 CASC3,EJC1 (1 of 1) PF09405 - CASC3/Barentsz eIF4AIII binding (Btz); Exon Junction Complex component intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCCGATCCCCAGCAACGTCCTGAGTATTTCAAGCCTTCTTCGGACCTTG
Internal bar code:TTGTTTACTGGATAGTGGTCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:322
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:CTCTCGTAACGCGTGCATTG
Suggested primer 2:CCTCCCCACGGTAGTAGTCA