Insertion junction: CLIP2.072778_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.072778
Chromosome:chromosome 1
Location:613677
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g003524 (1 of 1) PF13499//PF14531 - EF-hand domain pair (EF-hand_7) // Kinase-like (Kinase-like) 5'UTR
Cre01.g800006 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCGTCTGCATTTTTTCCTGGAGCGTGCAAATCTGTTTGGTCGCTCTCGC
Internal bar code:TAAATTTTATAGAACTAGGTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:991
LEAP-Seq percent confirming:95.6522
LEAP-Seq n confirming:44
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:46

Suggested primers for confirmation by PCR

Suggested primer 1:CCCATTTGTGAGGCAGGACT
Suggested primer 2:TGAGTTCGGGCGTGTTTGTA