Insertion junction: CLIP2.072785_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.072785
Chromosome:chromosome 12
Location:6527746
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g537900 (1 of 1) PF11927 - Protein of unknown function (DUF3445) (DUF3445) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GACCCCATGCCACAAAACCTCCCGGACCCCCCGACCGACCGACCGACCGA
Internal bar code:GCCGATGCTCTTGGATTCTGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:2700
LEAP-Seq percent confirming:75.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:GATGTTGCGGCGATAGGAGA
Suggested primer 2:TGTGACTACGGTTTCCACGG