Insertion junction: CLIP2.072788_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.072788
Chromosome:chromosome 3
Location:4597833
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g176600 FAP374 Flagellar Associated Protein 374 3'UTR
Cre03.g176651 MYSM1 (1 of 1) PF00249//PF01398 - Myb-like DNA-binding domain (Myb_DNA-binding) // JAB1/Mov34/MPN/PAD-1 ubiquitin protease (JAB); Histone H2A deubiquitinase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTGGAATGACTAGCAGCTAGCAAATCAGAGGCGGCGGTAGGCCGGTCGT
Internal bar code:TGCTTGATTCGATCTGTCCAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1285
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:29
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:ACCTTAAGAATGTGGGCCGG
Suggested primer 2:GCACATGCATAAGGAGCTGC