Insertion junction: CLIP2.072792_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.072792
Chromosome:chromosome 7
Location:1048898
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g319800 (1 of 1) IPR000104//IPR009148 - Antifreeze protein, type I // Streptococcal non-M secreted SibA 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTTATAAGGAAGTACGCACCTACTTGACACGCGAATCCCGCCACGAAAA
Internal bar code:AATTTTGGCTGGGTTGGGGCGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1810
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:46
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:46

Suggested primers for confirmation by PCR

Suggested primer 1:CAACCAGGCCGTTTGTTCAG
Suggested primer 2:GCACACGTACACACACACAC