Insertion junction: CLIP2.072795_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.072795
Chromosome:chromosome 12
Location:454173
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g494800 DII1,IDA-IC28,IDA4,p28IDA4 (1 of 1) K10410 - dynein light intermediate chain, axonemal (DNALI); Flagellar inner arm dynein light chain p28 5'UTR
Cre12.g494850 ADK3 Adenylate kinase; (1 of 1) PTHR23359//PTHR23359:SF72 - NUCLEOTIDE KINASE // ADENYLATE KINASE FAMILY PROTEIN 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCGCGATGTTGCGAGGGCGACGCTGCCATGCCAGCCCACTGGTCCACAT
Internal bar code:AGACCATGCCGCGATTTGCTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:3818
LEAP-Seq percent confirming:94.2308
LEAP-Seq n confirming:49
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:52

Suggested primers for confirmation by PCR

Suggested primer 1:CAGCTGTTGTGTTGTCAGGC
Suggested primer 2:CATCAAACGTCTGCGCGTAG