Insertion junction: CLIP2.072795_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.072795
Chromosome:chromosome 12
Location:454176
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g494800 DII1,IDA-IC28,IDA4,p28IDA4 (1 of 1) K10410 - dynein light intermediate chain, axonemal (DNALI); Flagellar inner arm dynein light chain p28 5'UTR
Cre12.g494850 ADK3 Adenylate kinase; (1 of 1) PTHR23359//PTHR23359:SF72 - NUCLEOTIDE KINASE // ADENYLATE KINASE FAMILY PROTEIN 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGACGCGCTACAACTTAAATCGAATAATTACCTTTATCCAAACGCACAT
Internal bar code:AGACCATGCCGCGATTTGCTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1636
LEAP-Seq percent confirming:97.1429
LEAP-Seq n confirming:34
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:CATCAAACGTCTGCGCGTAG
Suggested primer 2:CAGCTGTTGTGTTGTCAGGC