Insertion junction: CLIP2.072796_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.072796
Chromosome:mitogenome
Location:11247
Confidence (%):63
Locus systematic id Locus common name Defline Feature
CreMt.g802343 ChrepMp07,nad1,801499 NADH dehydrogenase subunit 1; (1 of 1) K03878 - NADH-ubiquinone oxidoreductase chain 1 (ND1) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAAAATAATATTAGATAGCTACGCTAGCATGCAAGGCGAAGAAAGCCAAG
Internal bar code:TATACTTGGTTCGCGTGCATGA

Confirmation - LEAP-Seq

LEAP-Seq distance:159
LEAP-Seq percent confirming:7.14286
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:GTTTCGGCCCACAAGTTTCC
Suggested primer 2:ACCAGCCAGTCGTAGTACCT