Insertion junction: CLIP2.072803_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.072803
Chromosome:chromosome 3
Location:6176143
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre03.g191150 (1 of 1) PTHR23322//PTHR23322:SF6 - FAS-ASSOCIATED PROTEIN // UBX DOMAIN-CONTAINING PROTEIN 7 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCAGAAGGGAAACACCCCGCCTGTTGGTTCCAGGGGTCGTTGGTTCAGT
Internal bar code:CACCATTTCTCAGTGAGAATTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1000
LEAP-Seq percent confirming:35.8025
LEAP-Seq n confirming:29
LEAP-Seq n nonconfirming:52
LEAP-Seq n unique pos:81

Suggested primers for confirmation by PCR

Suggested primer 1:CTGACCTTTGCAAACCTGGC
Suggested primer 2:GAGCGCTAACAAGCAGATGC