Insertion junction: CLIP2.072806_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.072806
Chromosome:chromosome 2
Location:1370023
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g083065 (1 of 2) 3.4.13.9 - Xaa-Pro dipeptidase / X-Pro dipeptidase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAACCCTCAAAACCCTGGCAGACACGCCCATGCCGCCCGGGCTGCTCAGG
Internal bar code:TGTACTTGGATCGAGGCAGGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:844
LEAP-Seq percent confirming:51.5625
LEAP-Seq n confirming:33
LEAP-Seq n nonconfirming:31
LEAP-Seq n unique pos:64

Suggested primers for confirmation by PCR

Suggested primer 1:AGAGCTCTGCTTGCCTTGAG
Suggested primer 2:AAGAATGCGGGCACAAACAC