Insertion junction: CLIP2.072808_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.072808
Chromosome:chromosome 9
Location:742387
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g404200 hypothetical protein 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGCGGTTCCCTGACTCGAGTCGGGTGACGGATCTACGTCGCCGGGGCCA
Internal bar code:TACTGATAGTACCTTTATATGA

Confirmation - LEAP-Seq

LEAP-Seq distance:3058
LEAP-Seq percent confirming:98.4848
LEAP-Seq n confirming:65
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:66

Suggested primers for confirmation by PCR

Suggested primer 1:GCCAGAATGCTGCGAATAGC
Suggested primer 2:TGACGCAACGTACGGTGTTA