Insertion junction: CLIP2.072808_4

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.072808
Chromosome:chromosome 9
Location:742389
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g404200 hypothetical protein 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGAAGGTAACTGTGATAGCAACAGGTTGAGCACACTCAGACATATGCCA
Internal bar code:TACTGATAGTACCTTTATATGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1272
LEAP-Seq percent confirming:88.2353
LEAP-Seq n confirming:30
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:34

Suggested primers for confirmation by PCR

Suggested primer 1:TGACGCAACGTACGGTGTTA
Suggested primer 2:GCCAGAATGCTGCGAATAGC