Insertion junction: CLIP2.072821_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.072821
Chromosome:chromosome 15
Location:1275322
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre15.g801727 NCL66 Nuclear Control of chloroplast-Like 66; (1 of 39) PF08373 - RAP domain (RAP) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTTGCCGGCTTCAACCCGCAAGCGCTCAGCAACTCGGCCTGGGCCCTGG
Internal bar code:GTCAGCAAAGGATGCATCCAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1209
LEAP-Seq percent confirming:4.16667
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:23
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:CTCGGTCTGAAACCCCTGAC
Suggested primer 2:TTACTTCTCGCCGCCACATT