Insertion junction: CLIP2.072823_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.072823
Chromosome:chromosome 9
Location:4162956
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre09.g399663 FXL7,FXL4 FixL-like PAS domain protein; (1 of 11) PF13426 - PAS domain (PAS_9) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGGATGAGCACCATGTAGGCGCAGATGCCCACTATGGTGCAGATGAGCA
Internal bar code:CGGAGATTTGGTTGAATAGGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:169
LEAP-Seq percent confirming:19.4444
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:29
LEAP-Seq n unique pos:36

Suggested primers for confirmation by PCR

Suggested primer 1:CCCGTCTTGCAGGTACTTGT
Suggested primer 2:ACATGGCCGTGCATAAGGAA