Insertion junction: CLIP2.072829_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.072829
Chromosome:chromosome 3
Location:5038179
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g179921 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCTGGCGGGTCCGCGCTGGGAAGATGCCCTGTATGTTTAAGGTCATTGA
Internal bar code:CTTCTGTCGTAGTTGGGCGTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2217
LEAP-Seq percent confirming:85.7143
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:ACGCTGCTCTATTACCGCTC
Suggested primer 2:TTGTTGTTGTAATGCCGCGG