Insertion junction: CLIP2.072837_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.072837
Chromosome:chromosome 17
Location:3553979
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g724873 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTAGCCGCATGTCTGAGTGTTGCAGGCGTTATAACGGCCCCCCGGCCCCC
Internal bar code:AATCTTGAAAGCAGTTCGGCTG

Confirmation - LEAP-Seq

LEAP-Seq distance:376
LEAP-Seq percent confirming:28.0
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:18
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:GCGCAACGGTATTCCCAATC
Suggested primer 2:CTCTTGCGTAGGGCTATGGG