Insertion junction: CLIP2.072856_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.072856
Chromosome:chromosome 6
Location:5355664
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre06.g285050 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTGCATCGCTACGGTACCTGTATGCATCTTGATGACATGACGCGCTGCT
Internal bar code:TCATCAGACCCGGACGTTTTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:456
LEAP-Seq percent confirming:33.3333
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:AGGAATTTCAGGACCAGCCG
Suggested primer 2:GCGTCGTATGTTCCATTGGC