Insertion junction: CLIP2.072858_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.072858
Chromosome:chromosome 11
Location:3099285
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g475150 Similar to PKD2 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAAGCCCAATGCTCGACAGTTTGCGCAACTAGCGCAGCCCACGAAAACTG
Internal bar code:CCTTCAGAAACCGGAATGCGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1842
LEAP-Seq percent confirming:43.1818
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:25
LEAP-Seq n unique pos:44

Suggested primers for confirmation by PCR

Suggested primer 1:CCAGGGAACTTGCTGCAGTA
Suggested primer 2:ACACCCCATGTCCATGACAC