Insertion junction: CLIP2.072868_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.072868
Chromosome:chromosome 3
Location:1671345
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g153000 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTATAGCGTGTGGCTAGCGTGTGAATGCAATCCGGGACTACGGCCGGGA
Internal bar code:CACAAGGTACGCGTGATTTTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:2053
LEAP-Seq percent confirming:64.7059
LEAP-Seq n confirming:55
LEAP-Seq n nonconfirming:30
LEAP-Seq n unique pos:85

Suggested primers for confirmation by PCR

Suggested primer 1:TCATCGGCTCACCTCCTGTA
Suggested primer 2:GTTGACAAGTCGTTGGTGGC