Insertion junction: CLIP2.072874_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.072874
Chromosome:chromosome 9
Location:627448
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g800986 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCCTACTGCCCCACGCGCCCCTGCCCCACAGCCACCAAGGCAGCCAGGC
Internal bar code:CCGTGGTGTCAGTGTAGCTTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:306
LEAP-Seq percent confirming:33.3333
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:ACGGAGGGTGATGAGGATGA
Suggested primer 2:AGTACGACGCCTGGTTTCAG