Insertion junction: CLIP2.072874_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.072874
Chromosome:chromosome 9
Location:627451
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g800986 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGAAGCTGGCGGTGTCCCGCATTGATGCGGGGCTGGGTCTGGGCGGTGA
Internal bar code:CCGTGGTGTCAGTGTAGCTTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1126
LEAP-Seq percent confirming:88.6076
LEAP-Seq n confirming:70
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:79

Suggested primers for confirmation by PCR

Suggested primer 1:AGTACGACGCCTGGTTTCAG
Suggested primer 2:ACGGAGGGTGATGAGGATGA