Insertion junction: CLIP2.072875_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.072875
Chromosome:chromosome 3
Location:8744351
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g208161 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCAAGAGCAATCAAAGCGTCTCCACGATCCGATCGCTGCTTAGTTGACGT
Internal bar code:TCGTTAGGGGCTTTGTGGTGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1806
LEAP-Seq percent confirming:94.1176
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:GTGCCTCGTGTGTTGTAGGA
Suggested primer 2:GTTCTGCAAGCCTTGGGTTG