Insertion junction: CLIP2.072877_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.072877
Chromosome:chromosome 8
Location:1627864
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre08.g365800 (1 of 1) IPR000104//IPR001077//IPR016461//IPR029063 - Antifreeze protein, type I // O-methyltransferase, family 2 // O-methyltransferase COMT-type // S-adenosyl-L-methionine-dependent methyltransferase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGGTTGGGCGCCGTCTGTGCCCCCGACCGAACCCACCTCCTGCCTCCGT
Internal bar code:GCGAACGTTATGCGTTAACAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:226
LEAP-Seq percent confirming:23.0769
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:CATGTGTGTGGCAGTGTGTG
Suggested primer 2:ACAATGCTCCAGGTCAGTCG