Insertion junction: CLIP2.072879_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.072879
Chromosome:chromosome 12
Location:5264993
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g527850 TRA1 (1 of 1) PTHR10741//PTHR10741:SF5 - TRANSLIN AND TRANSLIN ASSOCIATED PROTEIN X // TRANSLIN-ASSOCIATED PROTEIN X; Translin-like protein 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCCCGGCTAGGTCCTATAGCACAGCCTATCTGGCGCCATAGCCACAGTA
Internal bar code:AAGTAGATGGGAAGTCATTGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:6141
LEAP-Seq percent confirming:97.0297
LEAP-Seq n confirming:98
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:101

Suggested primers for confirmation by PCR

Suggested primer 1:GTCAAAGTTGGCACAGGCTG
Suggested primer 2:AATGCTGGTGTACGTCGTGT