Insertion junction: CLIP2.072881_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.072881
Chromosome:chromosome 9
Location:3575330
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g396661 DUO3,DIV39 (1 of 2) IPR000104//IPR001005//IPR009057 - Antifreeze protein, type I // SANT/Myb domain // Homeodomain-like 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGATGCCTCCCATCGCGAACCCGAGCCTGAGCAATGCACTGACAGTGAC
Internal bar code:GGGAAAGCTAGGACGGAACATC

Confirmation - LEAP-Seq

LEAP-Seq distance:2636
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:33
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:GTCATCCGCCAGTTCCAGAA
Suggested primer 2:TCAGTCTGGGGAATGGCAAC