Insertion junction: CLIP2.072888_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.072888
Chromosome:chromosome 3
Location:2490916
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g159300 (1 of 2) PF05255 - Uncharacterised protein family (UPF0220) (UPF0220) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAATTTTGCAGTGGAGTTGCTCGTTTTGAGTCCCTCATCACTGCAATTGC
Internal bar code:GATTAGTCAGTTTGTGTTGAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2221
LEAP-Seq percent confirming:85.7143
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:TTGACGGCATGGATGTGTGA
Suggested primer 2:GCAATGGAATAGAGCAGCGC