Insertion junction: CLIP2.072890_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.072890
Chromosome:chromosome 10
Location:2876303
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre10.g439600 (1 of 1) PTHR11649//PTHR11649:SF62 - MSS1/TRME-RELATED GTP-BINDING PROTEIN // PROTEIN SEY1 HOMOLOG intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGAGGCGGGAGGGGGTTGCCGACTCGGGGGGAGGGGGTTGCCGACGTCCA
Internal bar code:TGTCACATATACACATTCCTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:244
LEAP-Seq percent confirming:77.7778
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:GCTGTTATGGGCTTGGGACT
Suggested primer 2:TTCCGTAGCACCTGCAGAAG