Insertion junction: CLIP2.072891_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.072891
Chromosome:chromosome 7
Location:1294801
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g322300 XPD4,RAD3D RAD3/XP-D family DNA-binding helicase; (1 of 1) K11273 - chromosome transmission fidelity protein 1 [EC:3.6.4.13] (DDX11, CHL1, CTF1) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTACGCGCAAACTGTGCTTAATAGAGCCAATATGACTGGTTGCGGGGAG
Internal bar code:TCTTCGGGCGACGCCACGCCCG

Confirmation - LEAP-Seq

LEAP-Seq distance:2426
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:40
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:TGCCGCTTTCTTCACAGCTA
Suggested primer 2:GCGATGTCCTAGAGTGGTCG