Insertion junction: CLIP2.072897_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.072897
Chromosome:chromosome 2
Location:8125082
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre02.g144100 ELG12 (1 of 34) 2.4.2.41 - Xylogalacturonan beta-1,3-xylosyltransferase / Xylogalacturonan xylosyltransferase; Exostosin-like glycosyltransferase 12 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCGCGGGCTGGGGCATTCGCCTGGCGGAGGCGATGGTCAGCGGCTGCGT
Internal bar code:AGGAGTCGTTGAGGTACTGTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:726
LEAP-Seq percent confirming:81.8182
LEAP-Seq n confirming:36
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:44

Suggested primers for confirmation by PCR

Suggested primer 1:CAATACGCTGCACACTACGC
Suggested primer 2:CGACCCAGAAGTGAGTGCTT