Insertion junction: CLIP2.072897_3

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.072897
Chromosome:chromosome 7
Location:692950
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g317400 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGAGAGCATCATGGATGCCCTTGTAGTTTCTTAAGGGGGTGTCTGGTGA
Internal bar code:AATAATCCTCTCGCGCATTTAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1810
LEAP-Seq percent confirming:70.9677
LEAP-Seq n confirming:44
LEAP-Seq n nonconfirming:18
LEAP-Seq n unique pos:62

Suggested primers for confirmation by PCR

Suggested primer 1:CCGATCGACTCCTCTTGACG
Suggested primer 2:AAGGTTCGATCCGCACAACT