Insertion junction: CLIP2.072905_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.072905
Chromosome:chromosome 3
Location:7262441
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g207502 (1 of 7) K18932 - palmitoyltransferase (ZDHHC) 3'UTR
Cre03.g207550 ADH8,CAD2 Cinnamyl-alcohol dehydrogenase; (1 of 2) 1.1.1.195 - Cinnamyl-alcohol dehydrogenase / CAD outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTACACGTAATTGCTGCTACCAGCTGTGCCTCTATGCGACAGGCTCCCG
Internal bar code:GTGAATCTAGTTCGAGTTCTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:5152
LEAP-Seq percent confirming:99.4536
LEAP-Seq n confirming:182
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:183

Suggested primers for confirmation by PCR

Suggested primer 1:CCTGTAGCAGTGACGTTGGT
Suggested primer 2:GGAATCCAGCCCCATTGTCA