Insertion junction: CLIP2.072912_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.072912
Chromosome:chromosome 3
Location:4434281
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g175400 PGI,PGI1 Phosphoglucose isomerase 1; (1 of 1) 5.3.1.9 - Glucose-6-phosphate isomerase / Phosphosaccharomutase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AATTTCGGCGTGTGCGCGCCGAGGCGCCGTGAGGATTGCGGTGAGGAGCG
Internal bar code:GATCTGTAGCAAGCATCCTGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1345
LEAP-Seq percent confirming:90.2439
LEAP-Seq n confirming:37
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:41

Suggested primers for confirmation by PCR

Suggested primer 1:CACACACACACACAGCTTCG
Suggested primer 2:AGGACGGCTTCAACTACAGC