Insertion junction: CLIP2.072913_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.072913
Chromosome:chromosome 13
Location:747457
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g566650 LCS2 Long-chain acyl-CoA synthetase; (1 of 1) 2.7.8.11//6.2.1.3 - CDP-diacylglycerol--inositol 3-phosphatidyltransferase / Phosphatidylinositol synthase // Long-chain-fatty-acid--CoA ligase / Lignoceroyl-CoA synthase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCAAGTCGCGCCATCAGGCCGAGTTTAAGTTCTGCATGACTCAGCGCATC
Internal bar code:TCTAGGCTAGGTATAAGTCTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:904
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:30
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:TAACGCAATCCCTTCCCCAC
Suggested primer 2:GATACCCCCAACACGAAGCA