Insertion junction: CLIP2.072915_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.072915
Chromosome:chromosome 12
Location:1622625
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g486900 (1 of 1) 1.3.1.88 - tRNA-dihydrouridine(16/17) synthase (NAD(P)(+)) / tRNA-dihydrouridine synthase 1 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGAAGCATGGGCGCACCAAAGTATCACGTGGCGCCGATGGTGGACCAGG
Internal bar code:GCGGGGTCGGGGCAAGACATTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1489
LEAP-Seq percent confirming:57.8947
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:CGTGATTACGGCACAGCATG
Suggested primer 2:ATTGCTCATCGGGTTCTGCA