Insertion junction: CLIP2.072922_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.072922
Chromosome:chromosome 17
Location:1957897
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre17.g710150 RPT4,NSG8 26S proteasome regulatory subunit; (1 of 1) K03064 - 26S proteasome regulatory subunit T4 (PSMC6, RPT4) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGTGTGGTCAGGCACGGGCAAGACGCTTCTGGCTCGCGCCATCGCCTCC
Internal bar code:ATTGCTGTGACTCCTAGTTCTT

Confirmation - LEAP-Seq

LEAP-Seq distance:209
LEAP-Seq percent confirming:20.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:GTGCCGACGATGATCTTTGC
Suggested primer 2:TGCACAGCACTTACGCAAAC