Insertion junction: CLIP2.072924_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.072924
Chromosome:chromosome 11
Location:293433
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre11.g467563 (1 of 10) PTHR10174 - RETINALDEHYDE BINDING PROTEIN-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCACACCTGCACCACCCGCGGCGCAATTCATGTGCATACACGAGCCACTT
Internal bar code:GTTTGTGGTACGTATTTTATTG

Confirmation - LEAP-Seq

LEAP-Seq distance:691
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:45
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:45

Suggested primers for confirmation by PCR

Suggested primer 1:GCAACCACCAATGCATGTGT
Suggested primer 2:GGCGGGTCCACGATAATCAT