Insertion junction: CLIP2.072928_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.072928
Chromosome:chromosome 6
Location:5983422
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g290300 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCGCCGCTTCATCCCCTAAGGAAATGGGCGCCGTTTCCTTGTGTCCTGC
Internal bar code:TGTCCCACCATAGTACATAAAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1041
LEAP-Seq percent confirming:93.3333
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:GCACTCCGCACAATGCATAG
Suggested primer 2:CCGCCATGGCCATGTAAATG