Insertion junction: CLIP2.072929_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.072929
Chromosome:chromosome 7
Location:5901725
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g354000 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTGTGATGGGACAGGGTTCAAGGCAGGTTGGCGAGGTCCCGTAGGGTGC
Internal bar code:TTCACTGTCAATAAGTCTCGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1949
LEAP-Seq percent confirming:63.8298
LEAP-Seq n confirming:30
LEAP-Seq n nonconfirming:17
LEAP-Seq n unique pos:47

Suggested primers for confirmation by PCR

Suggested primer 1:CTCGGGCCCTTATCATCACC
Suggested primer 2:TTGTCGGACACGTTCCTCAG