Insertion junction: CLIP2.072933_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.072933
Chromosome:chromosome 7
Location:6422290
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g357750 (1 of 3) PTHR10383 - SERINE INCORPORATOR 5'UTR
Cre07.g357800 CCA1,CCDA1,CCDA (1 of 1) K06196 - cytochrome c-type biogenesis protein (ccdA); c-type cytochrome biogenesis protein 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTTCAACTGGTCGGACGAGTCTTGGCCTTTCCAAACTGGGCGTCCGCGA
Internal bar code:TCCATCGCCGTTTTTTTGTGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1503
LEAP-Seq percent confirming:73.8462
LEAP-Seq n confirming:48
LEAP-Seq n nonconfirming:17
LEAP-Seq n unique pos:65

Suggested primers for confirmation by PCR

Suggested primer 1:CGCTACCTGCTACCTGCTAC
Suggested primer 2:CGTCCTGTCCCTTCTTTCCC