Insertion junction: CLIP2.072935_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.072935
Chromosome:chromosome 11
Location:4298822
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g482450 (1 of 781) IPR000104 - Antifreeze protein, type I 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCATACTCTGGAAGAGACGTAAATGACTGTTGTCTATAAGGACCTGGTG
Internal bar code:TTGGTCAGACAGTGCGTTAATT

Confirmation - LEAP-Seq

LEAP-Seq distance:2051
LEAP-Seq percent confirming:96.1039
LEAP-Seq n confirming:74
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:77

Suggested primers for confirmation by PCR

Suggested primer 1:AGCAAGTGGAGAGATGGTGC
Suggested primer 2:TCAGGCTCAGGATTGCTGTG