Insertion junction: CLIP2.072952_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.072952
Chromosome:chromosome 1
Location:3207057
Confidence (%):63
Locus systematic id Locus common name Defline Feature
intergenic

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGGAAGGTGCAGGTCAGCATCAGGGAATGAGTGAGCCAAACGGCATCAT
Internal bar code:TAAGAGTCGAGGCGAGGGTTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1960
LEAP-Seq percent confirming:22.2222
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:AACTGCATACCTGACCCGTG
Suggested primer 2:ACGTAATAAGCGACCGCCAT