Insertion junction: CLIP2.072965_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.072965
Chromosome:chromosome 2
Location:5750901
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g116750 ATP1A Mitochondrial F1F0 ATP synthase, alpha subunit; (1 of 1) K02132 - F-type H+-transporting ATPase subunit alpha (ATPeF1A, ATP5A1, ATP1) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAACTCACTCCTGTCTATAGCAATCGTAGGGACGGTGCAAGCCATCCGTT
Internal bar code:AGGAATTAGTTGTAGTGTAAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:3348
LEAP-Seq percent confirming:56.4516
LEAP-Seq n confirming:35
LEAP-Seq n nonconfirming:27
LEAP-Seq n unique pos:62

Suggested primers for confirmation by PCR

Suggested primer 1:CAATCTTACCTGGCACCCGT
Suggested primer 2:ATGACAGGGAGGGCTGAGAT